Article

Kempster, C., Butler, G., Kuznecova, E., Taylor, K. A. ORCID: https://orcid.org/0000-0002-4599-7727, Kriek, N., Little, G., Sowa, M. A., Sage, T., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511, Gibbins, J. M. ORCID: https://orcid.org/0000-0002-0372-5352 and Pollitt, A. Y. ORCID: https://orcid.org/0000-0001-8706-5154 (2022) Fully automated platelet differential interference contrast image analysis via deep learning. Scientific Reports, 12. 4614. ISSN 2045-2322 doi: https://doi.org/10.1038/s41598-022-08613-2

Butler, G., Keeton, S. J., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 and Dash, P. R. (2020) A phenotypic switch in the dispersal strategy of breast cancer cells selected for metastatic colonization. Proceedings of the Royal Society B: Biological Sciences, 287 (1940). ISSN 0962-8452 doi: https://doi.org/10.1098/rspb.2020.2523

Cascant-Lopez, E., Crosthwaite, S. K., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 and Harrison, R. J. (2020) No evidence that homologs of key circadian clock genes direct circadian programs of development or mRNA abundance in Verticillium dahliae. Frontiers in Microbiology, 11 (1977). ISSN 1664-302X doi: https://doi.org/10.3389/fmicb.2020.01977

Wass, A. V., Butler, G., Taylor, T. B., Dash, P. R. and Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 (2020) Cancer cell lines show high heritability for motility but not generation time. Royal Society Open Science, 7 (4). 191645. ISSN 2054-5703 doi: https://doi.org/10.1098/rsos.191645

Taylor, T. B., Wass, A. V., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 and Dash, P. (2017) Resource competition promotes tumour expansion in experimentally evolved cancer. BMC Evolutionary Biology, 17. 268. ISSN 1471-2148 doi: https://doi.org/10.1186/s12862-017-1117-6

Taylor, T., Mulley, G. ORCID: https://orcid.org/0000-0003-0650-478X, McGuffin, L. ORCID: https://orcid.org/0000-0003-4501-4767, Johnson, L. ORCID: https://orcid.org/0000-0002-0006-1511, Brockhurst, M., Arseneault, T., Silby, M. and Jackson, R. (2015) Evolutionary rewiring of bacterial regulatory networks. Microbial Cell, 2 (7). pp. 256-258. ISSN 2311-2638 doi: https://doi.org/10.15698/mic2015.07.215

Taylor, T. B., Mulley, G. ORCID: https://orcid.org/0000-0003-0650-478X, Dills, A. H., Alsohim, A. S., McGuffin, L. J. ORCID: https://orcid.org/0000-0003-4501-4767, Studholme, D. J., Silby, M. W., Brockhurst, M. A., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 and Jackson, R. W. (2015) Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system. Science, 347 (6225). pp. 1014-1017. ISSN 0036-8075 doi: https://doi.org/10.1126/science.1259145

Alsohim, A. S., Taylor, T., Barrett, G. ORCID: https://orcid.org/0000-0003-1509-0179, Gallie, J., Zhang, X.-X., Altamirano-Junqueira, A. E., Johnson, L. ORCID: https://orcid.org/0000-0002-0006-1511, Rainey, P. B. and Jackson, R. (2014) The biosurfactant viscosin produced by Pseudomonas fluorescens SBW25 aids spreading motility and plant growth promotion. Environmental Microbiology, 16 (7). pp. 2267-2281. ISSN 1462-2920 doi: https://doi.org/10.1111/1462-2920.12469

Taylor, T. B., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511, Jackson, R. W., Brockhurst, M. A. and Dash, P. R. (2013) First steps in experimental cancer evolution. Evolutionary Applications, 6 (3). pp. 535-548. ISSN 1752-4571 doi: https://doi.org/10.1111/eva.12041

Jackson, R. W., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511, Clarke, S. R. and Arnold, D. L. (2011) Bacterial pathogen evolution: breaking news. Trends in Genetics, 27 (1). pp. 32-40. ISSN 0168-9525 doi: https://doi.org/10.1016/j.tig.2010.10.001

Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511, Cotton, J. A., Lichtenstein, C. P., Elgar, G. S., Nichols, R. A., Polly, P. D. and Le Comber, S. C. (2011) Stops making sense: translational trade-offs and stop codon reassignment. BMC Evolutionary Biology, 11 (1). 227. ISSN 1471-2148 doi: https://doi.org/10.1186/1471-2148-11-227

Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 (2010) Pseudogene rescue: an adaptive mechanism of codon reassignment. Journal of Evolutionary Biology, 23 (8). pp. 1623-1630. ISSN 1010-061X doi: https://doi.org/10.1111/j.1420-9101.2010.02027.x

Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 and Tricker, P. J. (2010) Epigenomic plasticity within populations: its evolutionary significance and potential. Heredity, 105 (1). pp. 113-121. ISSN 0018-067X doi: https://doi.org/10.1038/hdy.2010.25

Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511, Giraud, T., Anderson, R. and Hood, M. E. (2010) The impact of genome defense on mobile elements in Microbotryum. Genetica, 138 (3). pp. 313-319. ISSN 1573-6857 doi: https://doi.org/10.1007/s10709-009-9419-2

Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 (2008) Selfish genetic elements favor the evolution of a distinction between soma and germline. Evolution, 62 (8). pp. 2122-2124. ISSN 0014-3820 doi: https://doi.org/10.1111/j.1558-5646.2008.00433.x

Johnson, L. ORCID: https://orcid.org/0000-0002-0006-1511 (2008) Transposon silencing: the extraordinary epigenetics of a transposon trap. Heredity, 100 (1). p. 5. ISSN 1365-2540 doi: https://doi.org/10.1038/sj.hdy.6801064

Antonovics, J., Abbate, J. L., Baker, C. H., Daley, D., Hood, M. E., Jenkins, C. E., Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511, Murray, J. J., Panjeti, V., Rudolf, V. H., Sloan, D. and Vondrasek, J. (2007) Evolution by any other name: antibiotic resistance and avoidance of the E-word. PLoS Biology, 5 (2). e30. ISSN 1544-9173

Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 (2007) The genome strikes back: The evolutionary importance of defence against mobile elements. Evolutionary Biology, 34 (3-4). pp. 121-129. ISSN 0071-3260 doi: https://doi.org/10.1007/s11692-007-9012-5

Brookfield, J. F. and Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 (2006) The evolution of mobile DNAs: when will transposons create phylogenies that look as if there is a master gene? Genetics, 173 (2). pp. 1115-23. ISSN 0016-6731 doi: https://doi.org/10.1534/genetics.104.027219

Johnson, L. J. ORCID: https://orcid.org/0000-0002-0006-1511 and Brookfield, J. F. (2006) A test of the master gene hypothesis for interspersed repetitive DNA sequences. Molecular Biology and Evolution, 23 (2). pp. 235-9. ISSN 0737-4038 doi: https://doi.org/10.1093/molbev/msj034