Article

Alharbi, H. O., Sugden, P. and Clerk, A. ORCID: https://orcid.org/0000-0002-5658-0708 (2024) Mitogen-activated protein kinase signalling in rat hearts during postnatal development: MAPKs, MAP3Ks, MAP4Ks and DUSPs. Cellular Signalling, 124. 111397. ISSN 1873-3913 doi: https://doi.org/10.1016/j.cellsig.2024.111397

Authi, K. S., Khan, S., Gibbins, J. ORCID: https://orcid.org/0000-0002-0372-5352 and Brain, S. D. (2024) Evidence that Inositol-1,4,5-trisphosphate-3-kinase and Inositol-1,3,4,5-tetrakisphosphate are negative regulators of platelet function. Research and Practice in Thrombosis and Haemostasis. ISSN 2475-0379 (In Press)

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Bradley, J. M., Bugg, Z., Sackey, A., Andrews, S. C. ORCID: https://orcid.org/0000-0003-4295-2686, Wilson, M. T., Svistunenko, D. A., Moore, G. R. and Le Brun, N. (2024) The Ferroxidase centre of Escherichia coli Bacterioferritin plays a key role in the reductive mobilisation of the mineral iron core. Angewandte Chemie International Edition. ISSN 1521-3773 doi: https://doi.org/10.1002/anie.202401379

Cao, D., Wu, M., Gu, N., Sherratt, R. S. ORCID: https://orcid.org/0000-0001-7899-4445, Ghosh, U. and Sharma, P. K. (2024) Joint optimization of computation offloading and resource allocation considering task prioritization in ISAC-assisted vehicular network. IEEE Internet of Things. ISSN 2327-4662 doi: https://doi.org/10.1109/JIOT.2024.3360962

Clerk, A. ORCID: https://orcid.org/0000-0002-5658-0708, Amadi, S. U., Smith, S. J. and Sugden, P. H. (2024) Inhibiting the extracellular signal-regulated kinase 1/2 (ERK1/2) cascade in cancer and the heart: for better or worse, in sickness and health? International Journal of Drug Discovery and Pharmacology. ISSN 2653-6234 doi: https://doi.org/10.53941/ijddp.2024.100006

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Edmunds, N. S., Genc, A. G. and McGuffin, L. J. ORCID: https://orcid.org/0000-0003-4501-4767 (2024) Benchmarking of AlphaFold2 accuracy self-estimates as indicators of empirical model quality and ranking: a comparison with independent model quality assessment programmes. Bioinformatics, 40 (8). btae491. ISSN 1460-2059 doi: https://doi.org/10.1093/bioinformatics/btae491

Feijoo-Coronel, M. L., Mendes, B., Ramírez, D., Peña-Varas, C., Monteros-Silva, N. Q. E. d. l., Proaño-Bolaños, C., Oliveira, L. C. D., Lívio, D. F., Da Silva, J. A., Da Silva, J. M. S. F., Pereira, M. G. A. G., Rodrigues, M. Q. R. B., Teixeira, M. M., Granjeiro, P. A., Patel, K., Vaiyapuri, S. ORCID: https://orcid.org/0000-0002-6006-6517 and Almeida, J. R. (2024) Antibacterial and antiviral properties of Chenopodin-derived synthetic peptides. Antibiotics, 13 (1). 78. ISSN 2079-6382 doi: https://doi.org/10.3390/antibiotics13010078

Gerrans, J. and Sherratt, R. S. ORCID: https://orcid.org/0000-0001-7899-4445 (2024) Comparing XML and JSON characteristics as formats for data serialisation within ultra-low power embedded systems. IEEE Embedded Systems Letters. ISSN 1943-0663 doi: https://doi.org/10.1109/LES.2024.3450576

He, S., Li, G., Yi, T., Alfarraj, O., Tolba, A., Kumar Sangaiah, A. and Sherratt, R. S. ORCID: https://orcid.org/0000-0001-7899-4445 (2024) Graph structure learning-based multivariate time series anomaly detection in Internet of Things for human-centric consumer applications. IEEE Transactions on Consumer Electronics. ISSN 0098-3063 doi: https://doi.org/10.1109/TCE.2024.3409391 (In Press)

Hulin-Curtis, S., Geary, J. K., MacLachlan, B. J., Altmann, D. M., Baillon, L., Cole, D. K., Greenshields-Watson, A., Hesketh, S. J., Humphreys, I. R., Jones, I. M. ORCID: https://orcid.org/0000-0002-7738-2516, Lauder, S. N., Mason, G. H., Smart, K., Scourfield, D. O., Scott, J., Sukhova, K., Stanton, R. J., Wall, A., Rizkallah, P. J., Barclay, W. S., Gallimore, A. and Godkin, A. ORCID: https://orcid.org/0000-0002-1910-7567 (2024) A targeted single mutation in influenza A virus universal epitope transforms immunogenicity and protective immunity via CD4+ T cell activation. Cell Reports, 43 (6). 114259. ISSN 22111247 doi: https://doi.org/10.1016/j.celrep.2024.114259

Iddrisu, I., Monteagudo-Mera, A., Poveda, C., Shahzad, M., Walton, G. E. ORCID: https://orcid.org/0000-0001-5426-5635 and Andrews, S. C. ORCID: https://orcid.org/0000-0003-4295-2686 (2024) A review of the effect of iron supplementation on the gut microbiota of children in developing countries and the impact of prebiotics. Nutrition Research Reviews. ISSN 1475-2700 doi: https://doi.org/10.1017/S0954422424000118

Ige, S., Alaoui, K., Al-Dibouni, A., Dallas, M. L. ORCID: https://orcid.org/0000-0002-5190-0522, Cagampang, F. R., Sellayah, D., Chantler, P. D. and Boateng, S. Y. (2024) Leptin-dependent differential remodeling of visceral and pericardial adipose tissue following chronic exercise and psychosocial stress. The FASEB Journal, 38 (1). e23325. ISSN 1530-6860 doi: https://doi.org/10.1096/fj.202300269RRR

Kenny, M., Pollitt, A. Y. ORCID: https://orcid.org/0000-0001-8706-5154, Patil, S., Hiebner, D. W., Smolenski, A., Lakic, N., Fisher, R., Alsufyani, R., Lickert, S., Vogel, V. and Schoen, I. (2024) Contractility defects hinder glycoprotein VI-mediated platelet activation and affect platelet functions beyond clot contraction. Research and Practice in Thrombosis and Haemostasis, 8 (1). 102322. ISSN 2475-0379 doi: https://doi.org/10.1016/j.rpth.2024.102322

Ma, J., Xie, R., Ayyadhury, S., Ge, C., Gupta, A., Gupta, R., Gu, S., Zhang, Y., Lee, G., Kim, J., Lou, W., Li, H., Upschulte, E., Dickscheid, T., de Almeida, J., Wang, Y., Han, L., Yang, X., Labagnara, M., Gligorovski, V., Scheder, M., Rahi, S., Kempster, C., Pollitt, A. ORCID: https://orcid.org/0000-0001-8706-5154, Espinosa, L., Mignot, Y., Middeke, J., Eckardt, J.-N., Li, W., Li, Z., Cai, X., Bai, B., Greenwald, N., Van Valen, D., Weisbart, E., Cimini, B., Cheung, T., Bruck, O., Bader, G. and Wang, B. (2024) The multimodality cell segmentation challenge: towards universal solutions. Nature Methods. ISSN 1548-7105 doi: https://doi.org/10.1038/s41592-024-02233-6

McGuffin, L. J. ORCID: https://orcid.org/0000-0003-4501-4767 and Alharbi, S. M. A. (2024) ModFOLD9: a web server for independent estimates of 3D protein model quality. Journal of Molecular Biology. 168531. ISSN 1089-8638 doi: https://doi.org/10.1016/j.jmb.2024.168531

Meltem Sariyer, R., Gill, K. K., Needs, S. H. ORCID: https://orcid.org/0000-0003-3407-9637, Reis, N. M., Jones, C. I. ORCID: https://orcid.org/0000-0001-7537-1509 and Edwards, A. D. ORCID: https://orcid.org/0000-0003-2369-989X (2024) Looping flexible fluoropolymer microcapillary film extends analysis times for vertical microfluidic blood testing. Sensors, 24 (18). 5870. ISSN 1424-8220 doi: https://doi.org/10.3390/s24185870

Mendes, B., Edwards-Gayle, C. and Barrett, G. ORCID: https://orcid.org/0000-0003-1509-0179 (2024) Peptide lipidation and shortening optimises antibacterial, antibiofilm and membranolytic actions of an amphiphilic polylysine-polyphenyalanine octapeptide. Current Research in Biotechnology, 8. 100240. ISSN 2590-2628 doi: https://doi.org/10.1016/j.crbiot.2024.100240

Mitry, M. M.A., Dallas, M. ORCID: https://orcid.org/0000-0002-5190-0522, Boateng, S. Y., Greco, F. and Osborn, H. M.I. ORCID: https://orcid.org/0000-0002-0683-0457 (2024) Selective activation of prodrugs in breast cancer using metabolic glycoengineering and the tetrazine ligation bioorthogonal reaction. Bioorganic Chemistry, 147. 107304. ISSN 0045-2068 doi: https://doi.org/10.1016/j.bioorg.2024.107304

Paliwal, D. ORCID: https://orcid.org/0000-0002-6891-0778, Rabiey, M., Mauchline, T. H., Hassani-Pak, K., Nauen, R., Wagstaff, C. ORCID: https://orcid.org/0000-0001-9400-8641, Andrews, S. ORCID: https://orcid.org/0000-0003-4295-2686, Bass, C. and Jackson, R. W. (2024) Multiple toxins and a protease contribute to the aphid killing ability of Pseudomonas fluorescens PpR24. Environmental Microbiology, 26 (4). e16604. ISSN 1462-2920 doi: https://doi.org/10.1111/1462-2920.16604

Provenzale, I., Solari, F. A., Schonichen, C., Brouns, S. L.N., Fernandez, D. I., Kuijpers, M. J.E., Van der Meijden, P. E.J., Gibbins, J. M. ORCID: https://orcid.org/0000-0002-0372-5352, Sickman, A., Jones, C. ORCID: https://orcid.org/0000-0001-7537-1509 and Heemskerk, J. W.M. (2024) Endothelium-mediated regulation of platelet activation: involvement of multiple protein kinases. FASEB Journal, 38 (4). e23468. ISSN 0892-6638 doi: https://doi.org/10.1096/fj.202300360RR

Read, D. S., Gweon, H. S. ORCID: https://orcid.org/0000-0002-6218-6301, Bowes, M. J., Anjum, M. F., Crook, D. W., Chau, K. K., Hubbard, A., AbuOun, M., Tipper, H. J., Hoosdally, S. J., Bailey, M. J., Walker, A. S. and Nicole, S. (2024) Dissemination and persistence of antimicrobial resistance (AMR) along the wastewater-river continuum. Water Research, 264. 122204. ISSN 1879-2448 doi: https://doi.org/10.1016/j.watres.2024.122204

Salim, A., Williams, J., Almeida, J. R., Chandrasekharuni, G., Williams, H. F., Vaiyapuri, R., Vaiyapuri, M., Viswanath, R., Annamalai, T., Patel, K., Thirumalaikolundusubramanian, P., Senthilkumaran, S., Whitaker, R. and Vaiyapuri, S. ORCID: https://orcid.org/0000-0002-6006-6517 (2024) Challenges in rescuing snakes to protect human lives and promote snake conservation in Tamil Nadu, India. PLoS Neglected Tropical Diseases. ISSN 1935-2735 (In Press)

Senthilkumaran, S., Sampath, S., Almeida, J. R. ORCID: https://orcid.org/0000-0002-4637-4468, Williams, J., Williams, H. F., Patel, K., Thirumalaikolundusubramanian, P. and Vaiyapuri, S. ORCID: https://orcid.org/0000-0002-6006-6517 (2024) Pulmonary thromboembolism following Russell’s viper bites. Toxins, 16 (5). 222. ISSN 2072-6651 doi: https://doi.org/10.3390/toxins16050222

Shahzad, M., Saeed, M., Amin, H., Binmadi, N., Ullah, Z., Bibi, S. and Andrews, S. C. ORCID: https://orcid.org/0000-0003-4295-2686 (2024) The oral microbiome of newly diagnosed tuberculosis patients; a pilot study. Genomics, 116 (2). 110816. ISSN 1089-8646 doi: https://doi.org/10.1016/j.ygeno.2024.110816

Strong, V. ORCID: https://orcid.org/0000-0002-1762-1722, Holderbaum, W. ORCID: https://orcid.org/0000-0002-1677-9624 and Hayashi, Y. ORCID: https://orcid.org/0000-0002-9207-6322 (2024) Electro-active polymer hydrogels exhibit emergent memory when embodied in a simulated game environment. Cell Reports Physical Science. ISSN 2666-3864 doi: https://doi.org/10.1016/j.xcrp.2024.102151

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Vermeij, W. P., Alyodawi, K., Galen, I. v., Heide, J. L. v. d., Birkisdóttir, M. B., van’t Sant, L. J., Ozinga, R. A., Komninos, D. S.J., Smit, K., Rijksen, Y. M.A., Brandt, R. M.C., Barnhoorn, S., Jaarsma, D., Vaiyapuri, S. ORCID: https://orcid.org/0000-0002-6006-6517, Ritvos, O., Huber, T. B., Kretz, O. and Patel, K. (2024) Improved health by combining dietary restriction and promoting muscle growth in DNA repair-deficient progeroid mice. Journal of Cachexia, Sarcopenia and Muscle. ISSN 2190-6009 doi: https://doi.org/10.1002/jcsm.13570 (In Press)

Wang, D., Li, Z., Dey, N., González Crespo, R., Shi, F. and Sherratt, R. S. ORCID: https://orcid.org/0000-0001-7899-4445 (2024) Design element extraction of plantar pressure imaging employing meta-learning-based graphic convolutional neural networks. Applied Soft Computing, 158. 111598. ISSN 1872-9681 doi: https://doi.org/10.1016/j.asoc.2024.111598

Wang, D., Li, Z., Dey, N., Misra, B., Sherratt, R. S. ORCID: https://orcid.org/0000-0001-7899-4445 and Shi, F. (2024) Curvature generation based on weight-updated boosting using shoe last point-cloud measurements. Heliyon, 10 (4). e26498. ISSN 2405-8440 doi: https://doi.org/10.1016/j.heliyon.2024.e26498

Wang, J., Huang, G., Sherratt, R. S. ORCID: https://orcid.org/0000-0001-7899-4445, Huang, D. and Ni, J. (2024) Data secure storage mechanism for IIoT based on blockchain. Computers, Materials & Continua, 78 (3). pp. 4029-4048. ISSN 1546-2226 doi: https://doi.org/10.32604/cmc.2024.047468

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Book or Report Section

Borra, S., Dey, N. and Sherratt, S. ORCID: https://orcid.org/0000-0001-7899-4445 (2024) Biometric sensors. In: Jajodia, S., Samarati, P. and Yung, M. (eds.) Encyclopedia of Cryptography, Security and Privacy. Springer, Berlin. ISBN 9783030715205 doi: https://doi.org/10.1007/978-3-642-27739-9_1604-1

Conference or Workshop Item

Arditti, S., Habert, F., Saracbasi, O. O., Walker, G. and Carlson, T. (2024) Tackling the duality of obstacles and targets in shared control systems: a smart wheelchair table-docking example. In: 2023 IEEE International Conference on Systems, Man, and Cybernetics (SMC), 1-4 Oct 2023, Honolulu, Hawai'i, USA, pp. 4393-4398. doi: https://doi.org/10.1109/smc53992.2023.10393886

Thesis

Adejumo, S. (2024) Self-organisation in ant and bacteria colonies. PhD thesis, University of Reading. doi: https://doi.org/10.48683/1926.00116746

Alosaimi, M. (2024) The glc locus of Campylobacter jejuni. PhD thesis, University of Reading. doi: https://doi.org/10.48683/1926.00117781

Altukhaim, S. N. (2024) Digital healthcare technology for motor recovery of stroke patients in physical therapy. PhD thesis, University of Reading. doi: https://doi.org/10.48683/1926.00116247

Back, O. (2024) Bio-mimicry and self-organisation of the Belousov Zhabotinsky reaction. PhD thesis, University of Reading. doi: https://doi.org/10.48683/1926.00115298