Article

Taylor, T. B., Johnson, L. J., Jackson, R. W., Brockhurst, M. A. and Dash, P. R. (2013) First steps in experimental cancer evolution. Evolutionary Applications. ISSN 1752-4571 doi: 10.1111/eva.12041

Haapalainen, M., Mosorin, H., Dorati, F., Wu, R.-F., Roine, E., Taira, S., Nissinen, R., Mattinen, L., Jackson, R., Pirhonen, M. and Lin, N.-C. (2012) Hcp2, a secreted protein of the phytopathogen Pseudomonas syringae pv. tomato DC3000, is required for competitive fitness against bacteria and yeasts. Journal of Bacteriology, 194 (18). pp. 4810-4822. ISSN 1098-5530 doi: 10.1128/JB.00611-12

Bardaji, L., Añorga, M., Jackson, R. W., Martínez-Bilbao, A., Yanguas-Casás, N. and Murillo, J. (2011) Miniature transposable sequences are frequently mobilized in the bacterial plant pathogen Pseudomonas syringae pv. phaseolicola. PLoS ONE, 6 (10). e25773. ISSN 1932-6203 doi: 10.1371/journal.pone.0025773

Arnold, D. L., Lovell, H. C., Jackson, R. W. and Mansfield, J. W. (2011) Pseudomonas syringae pv. phaseolicola: from ‘has bean’ to supermodel. Molecular Plant Pathology, 12 (7). pp. 617-627. ISSN 1464-6722 doi: 10.1111/j.1364-3703.2010.00697.x

Silby, M. W., Winstanley, C., Godfrey, S. A.C., Levy, S. B. and Jackson, R. W. (2011) Pseudomonas genomes: diverse and adaptable. FEMS Microbiology Reviews, 35 (4). pp. 652-680. ISSN 1574-6976 doi: 10.1111/j.1574-6976.2011.00269.x

Jackson, R. W., Vinatzer, B., Arnold, D. L., Dorus, S. and Murillo, J. (2011) The influence of the accessory genome on bacterial pathogen evolution. Mobile Genetic Elements, 1 (1). pp. 55-65. ISSN 2159-2543 doi: 10.4161/mge.1.1.16432

Godfrey, S. A. C., Lovell, H. C., Mansfield, J. W., Corry, D. S., Jackson, R. W. and Arnold, D. L. (2011) The stealth episome: suppression of gene expression on the excised genomic island PPHGI-1 from Pseudomonas syringae pv. phaseolicola. PLoS Pathogens, 7 (3). e1002010. ISSN 1553-7374 doi: 10.1371/journal.ppat.1002010

Jackson, R. W., Johnson, L. J., Clarke, S. R. and Arnold, D. L. (2011) Bacterial pathogen evolution: breaking news. Trends in Genetics, 27 (1). pp. 32-40. ISSN 0168-9525 doi: 10.1016/j.tig.2010.10.001

Amos, M. R., Sanchez-Contreras, M., Jackson, R. W., Munoz-Berbel, X., Ciche, T. A., Yang, G., Cooper, R. M. and Waterfield, N. R. (2011) Influence of the Photorhabdus luminescens phosphomannose isomerase gene, manA, on mannose utilization, exopolysaccharide structure, and biofilm formation. Applied and Environmental Microbiology, 77 (3). pp. 776-785. ISSN 0099-2240 doi: 10.1128/AEM.02326-10

Godfrey, S.A.C., Mansfield, J.W., Corry, D.S., Lovell, H.C., Jackson, R.W. and Arnold, D.L. (2010) Confocal imaging of pseudomonas syringae pv. phaseolicola colony development in bean reveals reduced multiplication of strains containing the genomic island PPHGI-1. Molecular Plant-Microbe Interactions, 23 (10). pp. 1294-1302. ISSN 0894-0282 doi: 10.1094 /MPMI -05-10-0114

Knight, C.G., Zhang, X.X., Gunn, A., Brenner T., T., Jackson, R., Giddens, S.R., Prabhakar , S., Zitzmann, N. and Rainey, P.B. (2010) Testing temperature-induced proteomic changes in the plant-associated bacterium Pseudomonas fluorescens SBW25. Environmental Microbiology Reports, 2 (3). pp. 396-402. ISSN 1758-2229 doi: 10.1111/j.1758-2229.2009.00102.x

Green, S., Studholme, D.J., Laue, B.E., Dorati, F., Lovell, H., Arnold, D., Cottrell, J.E., Bridgett, S., Blaxter, M., Huitema, E., Thwaites, R., Sharpe, P.M., Jackson, R. and Kamoun, S. (2010) Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum. PLoS ONE, 5 (4). ISSN 1932-6203 doi: 10.1371/journal.pone.0010224

Lovell, H. C., Jackson, R. W., Mansfield, J. W., Godfrey, S. A. C., Hancock, J. T., Desikan, R. and Arnold, D. L. (2010) In planta conditions induce genomic changes in Pseudomonas syringae pv. phaseolicola. Molecular Plant Pathology, 12 (2). pp. 167-176. ISSN 1464-6722 doi: 10.1111/j.1364-3703.2010.00658.x

Lovell, H. C., Mansfield, J. W., Godfrey, S. A. C., Jackson, R. W., Hancock, J. T. and Arnold, D. L. (2009) Bacterial evolution by genomic island transfer occurs via DNA transformation in planta. Current Biology, 19 (18). pp. 1586-1590. ISSN 0960-9822 doi: 10.1016/j.cub.2009.08.018

Silby, M. W., Cerdeno-Tarraga, A. M., Vernikos, G. S., Giddens, S. R., Jackson, R. W., Preston, G. M., Zhang, X. X., Moon, C. D., Gehrig, S. M., Godfrey, S. A. C., Knight, C. G., Malone, J. G., Robinson, Z., Spiers, A. J., Harris, S., Challis, G. L., Yaxley, A. M., Harris, D., Seeger, K., Murphy, L., Rutter, S., Squares, R., Quail, M. A., Saunders, E., Mavromatis, K., Brettin, T. S., Bentley, S. D., Hothersall, J., Stephens, E., Thomas, C. M., Parkhill, J., Levy, S. B., Rainey, P. B. and Thomson, N. R. (2009) Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens. Genome Biology, 10 (5). p. 16. ISSN 1474-760X doi: 10.1186/gb-2009-10-5-r51

Aslam, S.N., Erbs, G., Morrissey, K.L., Newman, M.-A., Chinchilla, D., Boller, T., Molinaro, A., Jackson, R.W. and Cooper, R.M. (2009) Microbe-associated molecular pattern (MAMP) signatures, synergy, size and charge: influences on perception or mobility and host defence responses. Molecular Plant Pathology, 10 (3). pp. 375-387. ISSN 1464-6722 doi: 10.1111/J.1364-3703.2009.00537.X

Aslam, S.N., Newman, M.-A. , Erbs, G., Morrissey, K.L., Chinchilla, D. , Boller, T. , Jensen, T.T. , De Castro, C. , Ierano, T. , Molinaro, A. , Jackson, R.W., Knight, M.R. and Cooper, R.M. (2008) Bacterial polysaccharides suppress induced innate immunity by calcium chelation. Current Biology, 18 (14). pp. 1078-83. ISSN 1053-1144 doi: 10.1016/j.cub.2008.06.061

Arnold, D. L., Jackson, R. W., Waterfield, N. R. and Mansfield, J. W. (2007) Evolution of microbial virulence: the benefits of stress. Trends in Genetics, 23 (6). pp. 293-300. ISSN 0168-9525 doi: 10.1016/j.tig.2007.03.017

Giddens, S. R., Jackson, R. W., Moon, C. D., Jacobs, M. A., Zhang, X. X., Gehrig, S. M. and Rainey, P. B. (2007) Mutational activation of niche-specific genes provides insight into regulatory networks and bacterial function in a complex environment. Proceedings of the National Academy of Sciences of the United States of America, 104 (46). pp. 18247-18252. ISSN 0027-8424 doi: 10.1073/pnas.0706739104

Ma, Z., Smith, J. J., Zhao, Y., Jackson, R. W., Arnold, D. L., Murillo, J. and Sundin, G. W. (2007) Phylogenetic analysis of the pPT23A plasmid family of Pseudomonas syringae. Applied and Environmental Microbiology, 73 (4). pp. 1287-95. ISSN 0099-2240

Matthijs, S., Tehrani, K. A., Laus, G., Jackson, R. W., Cooper, R. M. and Cornelis, P. (2007) Thioquinolobactin, a pseudomonas siderophore with antifungal and anti-pythium activity. Environmental Microbiology, 9 (2). pp. 425-34. ISSN 1462-2912 doi: 10.1111/j.1462-2920.2006.01154.x

Jackson, R. W. and Giddens, S. R. (2006) Development and application of in vivo expression technology (IVET) for analysing microbial gene expression in complex environments. Infect Disord Drug Targets, 6 (3). pp. 207-40. ISSN 1871-5265 doi: 10.2174/187152606778249944

Paynter, C.D. , Salisbury, V.C., Arnold, D.L. and Jackson, R.W. (2006) The use of bioluminescence for monitoring in planta growth dynamics of a Pseudomonas syringae plant pathogen. European Journal of Plant Pathology, 115 (3). pp. 363-366. ISSN 0929-1873 doi: 10.1007/s10658-006-9018-3

Pitman, A. R., Jackson, R. W., Mansfield, J. W., Kaitell, V., Thwaites, R. and Arnold, D. L. (2005) Exposure to host resistance mechanisms drives evolution of bacterial virulence in plants. Current Biology, 15 (24). pp. 2230-2235. ISSN 0960-9822 doi: 10.1016/j.cub.2005.10.074

Jackson, R. W., Preston, G. M. and Rainey, P. B. (2005) Genetic characterization of pseudomonas fluorescens SBW25 rsp gene expression in the phytosphere and in vitro. Journal of Bacteriology, 187 (24). pp. 8477-8488. ISSN 1098-5530 doi: 10.1128/JB.187.24.8477-8488.2005

Scortichini, M., Rossi, M. P., Loreti, S., Bosco, A., Fiori, M., Jackson, R. W., Stead, D. E., Aspin, A., Marchesi, U., Zini, M. and Janse, J. D. (2005) Pseudomonas syringae pv. coryli, the causal agent of bacterial twig dieback of Corylus avellana. Phytopathology, 95 (11). pp. 1316-1324. ISSN 0031-949X doi: 10.1094/PHYTO-95-1316

Rivas, L. A., Mansfield, J., Tsiamis, G., Jackson, R. W. and Murillo, J. (2005) Changes in race-specific virulence in pseudomonas syringae pv. phaseolicola are Associated with a chimeric transposable element and rare deletion events in a plasmid-borne pathogenicity island. Applied and Environmental Microbiology, 71 (7). pp. 3778-3785. ISSN 0099-2240 doi: 10.1128/AEM.71.7.3778-3785.2005

Joardar, V., Lindeberg, M., Jackson, R. W., Selengut, J., Dodson, R., Brinkac, L. M., Daugherty, S. C., DeBoy, R., Durkin, A. S., Giglio, M. G., Madupu, R., Nelson, W. C., Rosovitz, M. J., Sullivan, S., Crabtree, J., Creasy, T., Davidsen, T., Haft, D. H., Zafar, N., Zhou, L., Halpin, R., Holley, T., Khouri, H., Feldblyum, T., White, O., Fraser, C. M., Chatterjee, A. K., Cartinhour, S., Schneider, D. J., Mansfield, J., Collmer, A. and Buell, C. R. (2005) Whole-genome sequence analysis of pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of Bacteriology, 187 (18). pp. 6488-6498. ISSN 0021-9193 doi: 10.1128/JB.187.18.6488-6498.2005

Arnold, D. L., Pitman, A. and Jackson, R. W. (2003) Pathogenicity and other genomic islands in plant pathogenic bacteria. Molecular Plant Pathology, 4 (5). pp. 407-420. ISSN 1464-6722 doi: 10.1046/j.1364-3703.2003.00187.x

Book or Report Section

Metraux, J. P., Jackson, R. W., Schnettler, E. and Goldbach, R. W. (2009) Plant pathogens as suppressors of host defense. In: Plant Innate Immunity. Advances in Botanical Research, 51. Academic Press Ltd-Elsevier Science Ltd, London, pp. 39-89. ISBN 9780123748348 doi: 10.1016/s0065-2296(09)51002-6

Arnold, D.L., Godfrey, S.A.C. and Jackson, R.W. (2009) Pseudomonas syringae genomics provides important insights to secretion systems, effector genes and the evolution of virulence. In: Jackson, R.W. (ed.) Plant Pathogenic Bacteria: Genomics and Molecular Biology. Caister Academic Press, UK. ISBN 9781904455370

Arnold, D.L. and Jackson, R.W. (2008) Genomic islands in plant-pathogenic bacteria. In: Schmidt, H. and Hensel, M. (eds.) Horizontal Gene Transfer in the Evolution of Pathogenesis. Advances in Molecular and Cellular Microbiology. Cambridge University Press, Cambridge, UK, pp. 137-158. ISBN 9780521862974

Moon, C.D., Giddens, S.R., Zhang, X.-X. and Jackson, R.W. (2008) Molecular mechanisms underpinning plant colonization of a plant growth-promoting rhizobacterium. In: Ahmad, I., Pichtel, J. and Hayat, S. (eds.) Plant-Bacteria Interactions. Strategies and Techniques to Promote Plant Growth. Wiley-VCH Verlag GmBH & Co., KGaA, Weinheim, Germany, pp. 111-128. ISBN 9783527319015