Number of items: 40.
Article
Bienestock, J., Gibson, G. ORCID: https://orcid.org/0000-0002-0566-0476, Klaenhammer, T. R., Walker, W. A. and Neish, A.
(2013)
New insights into probiotic mechanisms: a harvest from functional and metagenomic studies.
Gut Microbes, 4 (2).
pp. 94-100.
ISSN 1949-0984
doi: https://doi.org/10.4161/gmic.23283
Boulange, C. L., Claus, S. P., Chou, C. J., Collino, S., Montoliu, I., Kochhar, S., Holmes, E., Rezzi, S., Nicholson, J. K., Dumas, M. E. and Martin, F.-P. J.
(2013)
Early metabolic adaptation in C57BL/6 mice resistant to high fat diet induced weight gain involves an activation of mitochondrial oxidative pathways.
Journal of Proteome Research, 12 (4).
pp. 1956-1968.
ISSN 1535-3907
doi: https://doi.org/10.1021/pr400051s
Chapman, C.M.C., Gibson, G.R. ORCID: https://orcid.org/0000-0002-0566-0476, Todd, S. ORCID: https://orcid.org/0000-0002-9981-923X and Rowland, I.
(2013)
Comparative in vitro inhibition of urinary tract pathogens by single- and multi-strain probiotics.
European Journal of Nutrition, 52 (6).
pp. 1669-1677.
ISSN 1436-6215
doi: https://doi.org/10.1007/s00394-013-0501-2
Claus, S. P.
(2013)
Fighting undernutrition: don't forget the bugs.
Cell Host and Microbe, 13 (3).
pp. 239-240.
ISSN 1931-3128
doi: https://doi.org/10.1016/j.chom.2013.02.015
Claus, S. P. and Swann, J. R.
(2013)
Nutrimetabonomics: applications for nutritional sciences, with specific reference to gut microbial interactions.
Annual Review of Food Science and Technology, 4.
pp. 381-399.
ISSN 1941-1413
doi: https://doi.org/10.1146/annurev-food-030212-182612
Connolly, J., Valdramidis, V. P., Byrne, E., Karatzas, K.-A., Cullen, P. J., Keener, K. M. and Mosnier, J. P.
(2013)
Characterization and antimicrobial efficacy against E. coli of a helium/air plasma at atmospheric pressure created in a plastic package.
Journal of Physics D: Applied Physics, 46 (3).
035401.
ISSN 1361-6463
doi: https://doi.org/10.1088/0022-3727/46/3/035401
Cueva, C., Sánchez-Patán, F., Monagas, M., Walton, G. E. ORCID: https://orcid.org/0000-0001-5426-5635, Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476, Martín-Álvarez, P. J., Bartolomé, B. and Moreno-Arribas, M. V.
(2013)
In vitro fermentation of grape seed flavan-3-ol fractions by human faecal microbiota: changes in microbial groups and phenolic metabolites.
FEMS Microbiology Ecology, 83 (3).
pp. 792-805.
ISSN 1574-6941
doi: https://doi.org/10.1111/1574-6941.12037
De Castro, N. M., Yaqoob, P. ORCID: https://orcid.org/0000-0002-6716-7599, De la Fuente, M., Baeza, I. and Claus, S. P.
(2013)
Premature impairment of methylation pathway and cardiac metabolic dysfunction in fa/fa obese Zucker rats.
Journal of Proteome Research, 12 (4).
pp. 1935-1945.
ISSN 1535-3907
doi: https://doi.org/10.1021/pr400025y
Dewulf, E. M., Cani, P. D., Claus, S. P., Fuentes, S., Puylaert, P. G. B., Neyrinck, A. M., Bindels, L. B., de Vos, W. M., Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476, Thissen, J.-P. and Delzenne, N. M.
(2013)
Insight into the prebiotic concept: lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women.
Gut, 32 (8).
pp. 1112-1121.
ISSN 1468-3288
doi: https://doi.org/10.1136/gutjnl-2012-303304
El Aidy, S., Derrien, M., Merrifield, C. A., Levenez, F., Dore, J., Boekschoten, M. V., Dekker, J., Holmes, E., Zoetendal, E. G., van Baarlen, P., Claus, S. P. and Kleerbezem, M.
(2013)
Gut bacteria-host metabolic interplay during conventionalisation of the mouse germfree colon.
ISME Journal, 7.
pp. 743-755.
ISSN 1751-7370
doi: https://doi.org/10.1038/ismej.2012.142
El Aidy, S., Merrifield, C. A., Derrien, M., van Baarlen, P., Hooiveld, G., Levenez, F., Doré, J., Dekker, J., Holmes, E., Claus, S. P., Reijngoud, D. J. and Kleerebezem, M.
(2013)
The gut microbiota elicits a profound metabolic reorientation in the mouse jejunal mucosa during conventionalisation.
Gut, 62 (9).
pp. 1306-1314.
ISSN 1468-3288
doi: https://doi.org/10.1136/gutjnl-2011-301955
Feehily, C., O'Byrne, C.P. and Karatzas, K. A. G.
(2013)
Functional γ-aminobutyrate shunt in Listeria monocytogenes: role in acid tolerance and succinate biosynthesis.
Applied and Environmental Microbiology, 79 (1).
pp. 74-80.
ISSN 0099-2240
doi: https://doi.org/10.1128/AEM.02184-12
Guerra-Ordaz, A. A., Molist, F., Hermes, R. G., Gómez de Segura, A., La Ragione, R. M., Woodward, M. J., Tchorzewska, M. A., Collins, J. W., Pérez, J. F. and Martin-Orúe, S. M.
(2013)
Effect of inclusion of lactulose and Lactobacillus plantarum on the intestinal environment and performance of piglets at weaning.
Animal Feed Science and Technology, 185 (3-4).
pp. 160-168.
ISSN 0377-8401
doi: https://doi.org/10.1016/j.anifeedsci.2013.07.009
Hayward, M. R., Jansen, V. A. A. and Woodward, M. J.
(2013)
Comparative genomics of Salmonella enterica serovars Derby and Mbandaka, two prevalent serovars associated with different livestock species in the UK.
BMC Genomics, 14 (1).
p. 365.
ISSN 1471-2164
doi: https://doi.org/10.1186/1471-2164-14-365
Hobden, M. R., Martin-Morales, A., Guerin-Deremaux, L., Wils, D., Costabile, A., Walton, G. E. ORCID: https://orcid.org/0000-0001-5426-5635, Rowland, I., Kennedy, O. B. ORCID: https://orcid.org/0000-0003-3885-4872 and Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476
(2013)
In Vitro Fermentation of NUTRIOSE® FB06, a wheat dextrin soluble fibre, in a continuous culture human colonic model system.
PLoS ONE, 8 (10).
e77128.
doi: https://doi.org/10.1371/journal.pone.0077128
Hoyles, L., Clear, J. A. and McCartney, A. L.
(2013)
Use of denaturing gradient gel electrophoresis to detect Actinobacteria associated with the human faecal microbiota.
Anaerobe, 22.
pp. 90-96.
ISSN 1075-9964
doi: https://doi.org/10.1016/j.anaerobe.2013.06.001
Hoyles, L., Ortman, K., Cardew, S., Foster, G., Rogerson, F. and Falsen, E.
(2013)
Corynebacterium uterequi sp. nov., a non-lipophilic bacterium isolated from urogenital samples from horses.
Veterinary Microbiology, 165 (3-4).
pp. 469-474.
ISSN 0378-1135
doi: https://doi.org/10.1016/j.vetmic.2013.03.025
Inness, V.L., Khoo, C., Gross, K.L., Hoyles, L., Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476 and McCartney, A. L.
(2013)
An assessment of the prebiotic potential of single and blended substrates in anaerobic in vitro batch culture fermentations using canine faecal samples as inocula.
International Journal of Probiotics and Prebiotics, 8 (4).
p. 133.
ISSN 1555-1431
Kok, M. G. M., Ruijken, M. A., Swann, J. R., Wilson, I. D., Somsen, G. W. and de Jong, G. J.
(2013)
Anionic metabolic profiling of urine from antibiotic-treated
rats by capillary electrophoresis–mass spectrometry.
Analytical and Bioanalytical Chemistry, 405 (8).
pp. 2585-2594.
ISSN 1618-2650
doi: https://doi.org/10.1007/s00216-012-6701-4
La Ragione, R. M., Woodward, M. J., Kumar, M., Rodenberg, J., Fan, H., Wales, A. D. and Karaca, K.
(2013)
Efficacy of a live attenuated Escherichia coli O78:K80 vaccine in chickens and turkeys.
Avian Diseases, 57 (2).
pp. 273-279.
ISSN 0005-2086
doi: https://doi.org/10.1637/10326-081512-Reg.1
Lees, H. J., Swann, J. R., Wilson, I. D., Nicholson, J. K. and Holmes, E.
(2013)
Hippurate: the natural history of a mammalian-microbial co-metabolite.
Journal of Proteome Research, 12 (4).
pp. 1527-1546.
ISSN 1535-3907
doi: https://doi.org/10.1021/pr300900b
Lewis, M.
(2013)
A pig’s microbiota – a result of many factors.
Pig Progress, 29 (8).
pp. 24-26.
Lewis, M. C., Patel, D. V., Fowler, J., Duncker, S., Zuercher, A. W., Mercenier, A. and Bailey, M.
(2013)
Dietary supplementation with Bifidobacterium lactis NCC2818 from weaning reduces local immunoglobulin production in lymphoid-associated tissues but increases systemic antibodies in healthy neonates.
British Journal of Nutrition, 110 (7).
pp. 1243-1252.
ISSN 1475-2662
doi: https://doi.org/10.1017/S0007114513000251
Likotraftiti, E., Tuohy, K. M., Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476 and Rastall, R. A.
(2013)
Development of antimicrobial synbiotics using potentially-probiotic faecal isolates of Lactobacillus fermentum and Bifidobacterium longum.
Anaerobe, 20.
pp. 5-13.
ISSN 1075-9964
Lopez-Andres , P., Luciano, G., Vasta, V., Gibson, T. M., Biondi, L., Priolo, A. and Mueller-Harvey, I.
(2013)
Dietary quebracho tannins are not absorbed, but increase the antioxidant capacity of liver and plasma in sheep.
British Journal of Nutrition, 110 (4).
pp. 632-639.
ISSN 1475-2662
doi: https://doi.org/10.1017/S0007114512005703
Mann, E. R., You, J., Horneffer-van der Sluis, V., Bernardo, D., Omar Al-Hassi, H., Landy, J., Peake, S. T., Thomas, L. V., Tee, C. T., Lee, G. H., Hart, A. L., Yaqoob, P. ORCID: https://orcid.org/0000-0002-6716-7599 and Knight, S. C.
(2013)
Dysregulated circulating dendritic cell function in ulcerative colitis is partially restored by probiotic strain Lactobacillus casei Shirota.
Mediators of inflammation, 2013.
573576.
ISSN 0962-9351
doi: https://doi.org/10.1155/2013/573576
Mappley, L. J., Tchórzewska, M. A., Nunez, A., Woodward, M. and La Ragione, R. M.
(2013)
Evidence for systemic spread of the potentially zoonotic intestinal spirochaete Brachyspira pilosicoli in experimentally challenged laying chickens.
Journal of Medical Microbiology, 62 (2).
pp. 297-302.
ISSN 0022-2615
doi: https://doi.org/10.1099/jmm.0.052126-0
Mappley, L. J., Tchórzewska, M. A., Nunez, A., Woodward, M. J., Bramley, P. M. and La Ragione, R. M.
(2013)
Oral treatment of chickens with Lactobacillus reuteri LM1 reduces Brachyspira pilosicoli-induced pathology.
Journal of Medical Microbiology, 62 (2).
pp. 287-296.
ISSN 0022-2615
doi: https://doi.org/10.1099/jmm.0.051862-0
Merrifield, C. A., Lewis, M. C., Claus, S. P., Pearce, J. T. M., Cloarec, O., Duncker, S., Heinzmann, S. S., Dumas, M.-E., Kochar, S., Rezzi, S., Mercenier, A., Nicholson, J. K., Bailey, M. and Holmes, E.
(2013)
Weaning diet induces sustained metabolic phenotype
shift in the pig and influences host response to
Bifidobacterium lactis NCC2818.
Gut, 62 (6).
pp. 842-851.
ISSN 1468-3288
doi: https://doi.org/10.1136/gutjnl-2011-301656
Merrifield, C. A., Lewis, M. C., Claus, S., Pearce, J. T. M., Cloarec, O., Duncker, S., Heinzmann, S. S., Dumas, M., Kochhar, S., Rezzi, S., Mercenier, A., Nicholson, J. K., Bailey, M. and Holmes, E.
(2013)
Weaning diet induces sustained metabolic phenotype shift in the pig and influences host response to Bifidobacterium lactis NCC2818.
Gut, 62 (6).
pp. 842-851.
ISSN 1468-3288
doi: https://doi.org/10.1136/gutjnl-2011-301656
Mills, C. ORCID: https://orcid.org/0000-0002-8313-3700, Oruna-Concha, M. J. ORCID: https://orcid.org/0000-0001-7916-1592, Mottram, D. S., Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476 and Spencer, J. P. E. ORCID: https://orcid.org/0000-0003-2931-7274
(2013)
The effect of processing on chlorogenic acid content of commercially available coffee.
Food Chemistry, 141 (4).
pp. 3335-3340.
ISSN 0308-8146
doi: https://doi.org/10.1016/j.foodchem.2013.06.014
Petschow, B., Dore, J., Hibberd, P., Dinan, T., Reid, G., Blaser, M., Cani, P. D., Degnan, F. H., Foster, J., Gibson, G. ORCID: https://orcid.org/0000-0002-0566-0476, Hutton, J., Klaenhammer, T. R., Ley, R., Nieuwdorp, M., Pot, B., Relman, D., Serazin, A. and Sanders, M. E.
(2013)
Probiotics, prebiotics, and the host microbiome: the science of translation.
Annals of the New York Academy of Sciences, 1306.
pp. 1-17.
ISSN 1749-6632
doi: https://doi.org/10.1111/nyas.12303
Richards, S. E., Wang, Y., Claus, S. P., Lawler, D., Kochhar, S., Holmes, E. and Nicholson, J. K.
(2013)
Metabolic phenotype modulation by caloric restriction in a lifelong dog study.
Journal of Proteome Research, 12 (7).
pp. 3117-3127.
ISSN 1535-3907
doi: https://doi.org/10.1021/pr301097k
Sarbini, S. R., Kolida, S., Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476 and Rastall, R. A.
(2013)
In vitro fermentation of commercial α-gluco-oligosaccharide by faecal microbiota from lean and obese human subjects.
British Journal of Nutrition, 109 (11).
pp. 1980-1989.
ISSN 0007-1145
doi: https://doi.org/10.1017/S0007114512004205
Swann, J. R., Spagou, K., Lewis, M., Nicholson, J. K., Glei, D. A., Seeman, T. E., Coe, C. L., Goldman, N., Ryff, C. D., Weinstein, M. and Holmes, E.
(2013)
Microbial−mammalian cometabolites dominate the age-associated urinary metabolic phenotype in Taiwanese and American populations.
Journal of Proteome Research, 12 (7).
pp. 3166-3180.
ISSN 1535-3907
doi: https://doi.org/10.1021/pr4000152
Tejero-Sarinena, S., Barlow, J., Costabile, A., Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476 and Rowland, I.
(2013)
Antipathogenic activity of probiotics against Salmonella Typhimurium and Clostridium difficile in anaerobic batch culture systems: is it due to synergies in probiotic mixtures or the specificity of single strains?
Anaerobe, 24.
pp. 60-65.
ISSN 1075-9964
doi: https://doi.org/10.1016/j.anaerobe.2013.09.011
Vulevic, J., Juric, A., Tzortzis, G. and Gibson, G. R. ORCID: https://orcid.org/0000-0002-0566-0476
(2013)
A mixture of trans-galactooligosaccharides reduces markers of metabolic syndrome and modulates the fecal microbiota and immune function of overweight adults.
Journal of Nutrition, 143 (3).
pp. 324-331.
ISSN 1541-6100
doi: https://doi.org/10.3945/jn.112.166132
Wu, G., Day, M. J., Mafura, M. T., Nunez-Garcia, J., Fenner, J. J., Sharma, M., van Essen-Zandbergen, A., Rodríguez, I., Dierikx, C., Kadlec, K., Schink, A.-K., Wain, J., Helmuth, R., Guerra, B., Schwarz, S., Threlfall, J., Woodward, M. J.,, Woodford, N., Coldham, N. and Mevius, D.
(2013)
Comparative Analysis of ESBL-Positive Escherichia coli isolates from Animals and Humans from the UK, the Netherlands and Germany.
PLoS ONE, 8 (9).
ISSN 1932-6203
doi: https://doi.org/10.1371/journal.pone.0075392
argiri, a., Zoumpopoulou, g., Karatzas, K.-A., Tsakalidou, e., Nychas, G.-J., Panagou, E. and Tassou, C.
(2013)
Selection of potential probiotic lactic acid bacteria from fermented olives by in vitro tests.
Food Microbiology, 33 (2).
pp. 282-291.
ISSN 0740-0020
Book or Report Section
Jarvis, B.
(2013)
15. Statistical approaches to the analysis of microbiological data.
In: Granato, D. and Ares, G. (eds.)
Mathematical and Statistical Methods in Food Science and Technology.
John Wiley & Sons, Inc., Hoboken, USA, pp. 249-284, Chapter 15.
ISBN 9781118433683
doi: https://doi.org/10.1002/9781118434635.ch15
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