A

Amiot, A., Dona, A. C., Wijeyesekera, Anisha, Tournigand, C., Baumgaertner, I., Lebaleur, Y., Sobhani, I. and Holmes, E. (2015) 1H NMR spectroscopy of fecal extracts enables detection of advanced colorectal neoplasia. Journal of Proteome Research, 14 (9). pp. 3871-3881. ISSN 1535-3907 doi: https://doi.org/10.1021/acs.jproteome.5b00277

Andreas, Nicholas J., Hyde, Matthew J., Gomez‐Romero, Maria, Lopez-Gonzalvez, Maria A., Villaseñor, Alma, Wijeyesekera, Anisha, Barbas, Coral, Modi, Neena, Holmes, Elaine and Garcia-Perez, Isabel (2015) Multiplatform characterization of dynamic changes in breast milk during lactation. Electrophoresis, 36 (18). pp. 2269-2285. ISSN 0173-0835 doi: https://doi.org/10.1002/elps.201500011

B

Bergillos-Meca, Triana, Costabile, Adele, Walton, Gemma, Moreno-Montoro, Miriam, Ruiz-Bravo, Alfonso and Ruiz-López, María Dolores (2015) In vitro evaluation of the fermentation properties and potential probiotic activity of Lactobacillus plantarum C4 in batch culture systems. LWT-Food Science and Technology, 60 (1). pp. 420-426. ISSN 0023-6438 doi: https://doi.org/10.1016/j.lwt.2014.08.006

Blatchford, P., Bentley-Hewitt, K. L., Stoklosinski, H., McGhie, T., Gearry, R., Gibson, G. and Ansell, J. (2015) In vitro characterisation of the fermentation profile and prebiotic capacity of gold-fleshed kiwifruit. Beneficial Microbes, 6 (6). pp. 829-839. ISSN 1876-2883 doi: https://doi.org/10.3920/BM2015.0006

Blatchford, Paul, Stoklosinski, Halina, Walton, Gemma, Swann, Jonathan, Gibson, Glenn, Gearry, Richard and Ansell, Juliet (2015) Kiwifruit fermentation drives positive gut microbial and metabolic changes irrespective of initial microbiota composition. Bioactive Carbohydrates and Dietary Fibre, 6 (1). pp. 37-45. ISSN 2212-6198 doi: https://doi.org/10.1016/j.bcdf.2015.07.001

C

Chambers, Edward S., Viardot, Alexander, Psichas, Arianna, Morrison, Douglas J., Murphy, Kevin G., Zac-Varghese, Sagen E. K., Macdougall, Kenneth, Preston, Tom, Tedford, Catriona, Finlayson, Graham S., Blundell, John E., Bell, Jimmy D., Thomas, E. Louise, Mt-Isa, Sharul, Ashby, Deborah, Gibson, Glen R., Kolida, Sofia, Dhillo, Waljit S., Bloom, Stephen R., Morley, Wayne, Clegg, Stuart and Frost, Gary (2015) Effects of targeted delivery of propionate to the human colon on appetite regulation, body weight maintenance and adiposity in overweight adults. Gut, 64 (11). pp. 1744-1754. ISSN 1468-3288 doi: https://doi.org/10.1136/gutjnl-2014-307913

Chekmeneva, E., Correia, G., Denes, J., Gomez-Romero, M., Wijeyesekera, Anisha, Perenyi, D. R., Koot, Y., Boomsma, C., Want, E. J., Dixon, P. H., Macklon, N. S., Chan, Q., Takats, Z., Nicholson, J. K. and Holmes, E. (2015) Development of nanoelectrospray high resolution isotope dilution mass spectrometry for targeted quantitative analysis of urinary metabolites: application to population profiling and clinical studies. Analytical Methods, 7 (12). pp. 5122-5133. ISSN 1759-9679 doi: https://doi.org/10.1039/c5ay00850f

Correia, Goncalo D., Ng, Keng Wooi, Wijeyesekera, Anisha, Gala-Peralta, Sandra, Williams, Rachel, MacCarthy-Morrogh, S, Jiménez, Beatriz, Inwald, David, Macrae, Duncan, Frost, Gary, Holmes, Elaine and Pathan, Nazima (2015) Metabolic profiling of children undergoing surgery for congenital heart disease. Critical Care Medicine, 43 (7). pp. 1467-1476. ISSN 1530-0293 doi: https://doi.org/10.1097/CCM.0000000000000982

Costabile, Adele, Walton, Gemma E., Tzortzis, George, Vulevic, Jelena, Charalampopoulos, Dimitris and Gibson, Glenn R. (2015) Effects of orange juice formulation on prebiotic functionality using an in vitro colonic model sytem. PLoS ONE, 10 (3). e0121955. ISSN 1932-6203 doi: https://doi.org/10.1371/journal.pone.0121955

Costabile, Adele, Walton, Gemma ORCID: https://orcid.org/0000-0001-5426-5635, Tzortzis, George, Vulevic, Jelena, Charalampopoulos, Dimitris ORCID: https://orcid.org/0000-0003-1269-8402 and Gibson, Glenn (2015) Development of a bread delivery vehicle for dietary prebiotics to enhance food functionality targeted at those with metabolic syndrome. Gut Microbes, 6 (5). pp. 300-309. ISSN 1949-0984 doi: https://doi.org/10.1080/19490976.2015.1064577

E

Eid, Noura, Osmanova, Hristina, Natchez, Cecile, Walton, Gemma, Costabile, Adele, Gibson, Glenn, Rowland, Ian and Spencer, Jeremy P.E. (2015) Impact of palm date consumption on microbiota growth and large intestinal health: a randomised, controlled, cross-over, human intervention study. British Journal of Nutrition, 114 (8). pp. 1226-1236. ISSN 1475-2662 doi: https://doi.org/10.1017/S0007114515002780

Elliott, Paul, Posma, Joram M., Chan, Queenie, Garcia-Perez, Isabel, Wijeyesekera, Anisha ORCID: https://orcid.org/0000-0001-6151-5065, Bictash, Magda, Ebbels, Timothy M.D, Ueshima, Hirotsugu, Zhao, Liancheng, van Horn, Linda, Daviglus, Martha, Stamler, Jeremiah, Holmes, Elaine and Nicholson, Jeremy K. (2015) Urinary metabolic signatures of human adiposity. Science Translational Medicine, 7 (285). 285ra62. ISSN 1946-6242 doi: https://doi.org/10.1126/scitranslmed.aaa5680

Escalona, E. E., Leng, J., Dona, A. C., Merrifield, C. A., Holmes, E., Proudman, C. J. and Swann, J. R. (2015) Dominant components of the Thoroughbred metabolome characterised by 1H‐NMR spectroscopy: a metabolite atlas of common biofluids. Equine Veterinary Journal, 47 (6). pp. 721-730. ISSN 2042-3306 doi: https://doi.org/10.1111/evj.12333

H

Hayward, Matthew R., AbuOun, Manal, Woodward, Martin J. and Jansen, Vincent A. A. (2015) Temperature and oxygen dependent metabolite utilization by Salmonella enterica Serovars Derby and Mbandaka. PLoS ONE, 10 (3). e0120450. ISSN 1932-6203 doi: https://doi.org/10.1371/journal.pone.0120450

Hobden, Mark R., Guérin-Deremaux, Laetitia, Rowland, Ian, Gibson, Glenn R. and Kennedy, Orla B. (2015) Potential anti-obesogenic properties of non-digestible carbohydrates: specific focus on resistant dextrin. Proceedings of the Nutrition Society, 74 (3). pp. 258-267. ISSN 0029-6651 doi: https://doi.org/10.1017/S0029665115000087

Holmes, Elaine, Wijeyesekera, Anisha, Taylor-Robinson, Simon D. and Nicholson, Jeremy K. (2015) The promise of metabolic phenotyping in gastroenterology and hepatology. Nature Reviews in Gastroenterology and Hepatology, 12 (8). pp. 458-471. ISSN 1759-5045 doi: https://doi.org/10.1038/nrgastro.2015.114

Hoyles, Lesley, Murphy, James, Neve, Horst, Heller, Knut J., Turton, Jane F., Mahony, Jennifer, Sanderson, Jeremy D., Hudspith, Barry, Gibson, Glenn R., McCartney, Anne L. and van Sinderen, Douwe (2015) Klebsiella pneumoniae subsp. pneumoniae–bacteriophage combination from the caecal effluent of a healthy woman. PeerJ, 3. e1061. ISSN 2167-8359 doi: https://doi.org/10.7717/peerj.1061

J

Johnson, L. P., Walton, Gemma E., Psichas, A., Frost, G. S., Gibson, Glenn R. and Barraclough, T. G. (2015) Prebiotics modulate the effects of antibiotics on gut microbial diversity and functioning in vitro. Nutrients, 7 (6). pp. 4480-4497. ISSN 2072-6643 doi: https://doi.org/10.3390/nu7064480

L

Le Roy, C. I., Mappley, L. J., La Ragione, R. M., Woodward, M. J. and Claus, S. P. (2015) Brachyspira pilosicoli-induced avian intestinal spirochaetosis. Microbial Ecology in Health and Disease, 26. 28853. ISSN 1651-2235 doi: https://doi.org/10.3402/mehd.v26.28853

Le Roy, Caroline Ivanne, Stspetova, Jelena, Sepp, Epp, Songisepp, Epp, Claus, Sandrine P. and Mikelsaar, Marika (2015) New insights into the impact of Lactobacillus population on host-bacteria metabolic interplay. Oncotarget, 31 (6). pp. 30545-30556. ISSN 1949-2553 doi: https://doi.org/10.18632/oncotarget.5906

Lockyer, Stacey, Corona, Giulia, Yaqoob, Parveen, Spencer, Jeremy P E and Rowland, Ian (2015) Secoiridoids delivered as olive leaf extract induce acute improvements in human vascular function and reduction of an inflammatory cytokine: a randomised, double-blind, placebo-controlled, cross-over trial. British Journal of Nutrition, 114 (01). pp. 75-83. ISSN 0007-1145 doi: https://doi.org/10.1017/S0007114515001269

M

Mills, Charlotte E., Touzonis, Xenofon, Oruna-Concha, Maria-Jose, Mottram, Don S., Gibson, Glenn R. and Spencer, Jeremy P. E. (2015) In vitro colonic metabolism of coffee and chlorogenic acid results in selective changes in human faecal microbiota growth. British Journal of Nutrition, 113 (8). pp. 1220-1227. ISSN 0007-1145 doi: https://doi.org/10.1017/S0007114514003948

N

Nyangale, Edna, Farmer, Sean, Cash, Howard, Keller, David, Chernoff, David and Gibson, Glenn (2015) Bacillus coagulans GBI-30, 6086 modulates Faecalibacterium prausnitzii in older men and women. Journal of Nutrition, 145 (7). pp. 1446-1452. ISSN 0022-3166 doi: https://doi.org/10.3945/jn.114.199802

P

Pereira, Dora I. A., Aslam, Mohamad F., Frazer, David M., Schmidt, Annemarie, Walton, Gemma, McCartney, Anne L., Gibson, Glenn R., Anderson, Greg J. and Powell, Jonathan J. (2015) Dietary iron depletion at weaning imprints low microbiome diversity and this is not recovered with oral nano Fe(III). MicrobiologyOpen, 4 (1). pp. 12-27. ISSN 2045-8827 doi: https://doi.org/10.1002/mbo3.213

R

Ramnani, Priya, Costabile, Adele, Bustillo, A. G. R. and Gibson, Glenn R. (2015) A randomised, double- blind, cross-over study investigating the prebiotic effect of agave fructans in healthy human subjects. Journal of Nutritional Science, 4. e10. ISSN 2048-6790 doi: https://doi.org/10.1017/jns.2014.68

Rastall, R. A. and Gibson, Glenn R. (2015) Recent developments in prebiotics to selectively impact beneficial microbes and promote intestinal health. Current Opinion in Biotechnology, 32. pp. 42-46. ISSN 0958-1669 doi: https://doi.org/10.1016/j.copbio.2014.11.002

Ravi, Anuradha, Avershina, Ekaterina, Foley, Steven L., Ludvigsen, Jane, Storrø, Ola, Øien, Torbjørn, Johnsen, Roar, McCartney, Anne L., L’Abée-Lund, Trine M. and Rudi, Knut (2015) The commensal infant gut meta-mobilome as a potential reservoir for persistent multidrug resistance integrons. Scientific Reports, 5. 15317. ISSN 2045-2322 doi: https://doi.org/10.1038/srep15317

Reid, Gregor, Brigidi, Patrizia, Burton, Jeremy P., Contractor, Nikhat, Duncan, Sylvia, Fargier, Emilie, Hill, Colin, Lebeer, Sarah, Martin, Rocio, McBain, Andrew J., Mor, Gil, O'Neill, Catherine, Rodriguez, Juan Miguel, Swann, Jonathan, Hemert, Saskia van and Ansell, Juliett (2015) Microbes central to human reproduction. American Journal of Reproductive Immunology, 73 (1). pp. 1-11. ISSN 1600-0897 doi: https://doi.org/10.1111/aji.12319

S

Sannasiddappa, Thippeswamy, Hood, Graham, Hanson, Kevan, Costabile, Adele, Gibson, Glenn and Clarke, Simon (2015) Staphylococcus aureus MnhF mediates cholate efflux and facilitates survival under human colonic conditions. Infection and Immunity, 83 (6). pp. 2350-2357. ISSN 0019-9567 doi: https://doi.org/10.1128/IAI.00238-15

T

Thorasin, Thanikan, Hoyles, Lesley and McCartney, Anne L. (2015) Dynamics and diversity of the 'Atopobium cluster' in the human faecal microbiota, and phenotypic characterization of 'Atopobium cluster' isolates. Microbiology, 161 (3). pp. 565-579. ISSN 1465-2080 doi: https://doi.org/10.1099/mic.0.000016

V

Vimaleswaran, Karani S., Le Roy, Caroline I. and Claus, Sandrine P. (2015) Foodomics for personalized nutrition: how far are we? Current Opinion in Food Science, 4. pp. 129-135. ISSN 2214-7993 doi: https://doi.org/10.1016/j.cofs.2015.07.001

Vulevic, Jelena, Juric, Aleksandra, Walton, Gemma, Claus, Sandrine, Tzortzis, George, Toward, Ruth and Gibson, Glenn (2015) Influence of galacto-oligosaccharide mixture (B-GOS) on gut microbiota, immune parameters and metabonomics in elderly persons. British Journal of Nutrition, 114 (4). pp. 586-595. ISSN 0007-1145 doi: https://doi.org/10.1017/S0007114515001889

W

Williams, C. F., Walton, Gemma, Jiang, L., Plummer, S., Garaiova, I. and Gibson, Glenn R. (2015) Comparative analysis of intestinal tract models. Annual Review of Food Science and Technology, 6 (1). pp. 329-350. ISSN 1941-1413 doi: https://doi.org/10.1146/annurev-food-022814-015429

Woodward, M. J., Mappley, L. P., Le Roy, C. I., Claus, S. P., Davies, P., Thompson, G. and La Ragione, R. M. (2015) Drinking water application of Denagard® Tiamulin for control of Brachyspira pilosicoli infection of laying poultry. Research in Veterinary Science, 103. pp. 87-95. ISSN 0034-5288 doi: https://doi.org/10.1016/j.rvsc.2015.09.015

Woodward, Martin J., Mappley, Luke, Le Roy, Caroline, Claus, Sandrine P., Davies, Paul, Thompson, Gavin and La Ragione, Roberto M. (2015) Drinking water application of Denargard Tiamulin for control of Brachyspira pilosicoli infection of laying poultry. Research in Veterinary Science, 103. pp. 87-95. ISSN 0034-5288 doi: https://doi.org/10.1016/j.rvsc.2015.09.015